29 research outputs found

    S1 File -

    No full text
    Mosquito-borne diseases cause a huge burden on public health worldwide. The viruses that cause these diseases impact the behavioural traits of mosquitoes, including locomotion and feeding. Understanding these traits can help in improving existing epidemiological models and developing effective mosquito traps. However, it is difficult to understand the flight behaviour of mosquitoes due to their small sizes, complicated poses, and seemingly random moving patterns. Currently, no open-source tool is available that can detect and track resting or flying mosquitoes. Our work presented in this paper provides a detection and trajectory estimation method using the Mask RCNN algorithm and spline interpolation, which can efficiently detect mosquitoes and track their trajectories with higher accuracy. The method does not require special equipment and works excellently even with low-resolution videos. Considering the mosquito size, the proposed method’s detection performance is validated using a tracker error and a custom metric that considers the mean distance between positions (estimated and ground truth), pooled standard deviation, and average accuracy. The results showed that the proposed method could successfully detect and track the flying (≈ 96% accuracy) as well as resting (100% accuracy) mosquitoes. The performance can be impacted in the case of occlusions and background clutters. Overall, this research serves as an efficient open-source tool to facilitate further examination of mosquito behavioural traits.</div

    Error tracking for scenario 2.

    No full text
    Mosquito-borne diseases cause a huge burden on public health worldwide. The viruses that cause these diseases impact the behavioural traits of mosquitoes, including locomotion and feeding. Understanding these traits can help in improving existing epidemiological models and developing effective mosquito traps. However, it is difficult to understand the flight behaviour of mosquitoes due to their small sizes, complicated poses, and seemingly random moving patterns. Currently, no open-source tool is available that can detect and track resting or flying mosquitoes. Our work presented in this paper provides a detection and trajectory estimation method using the Mask RCNN algorithm and spline interpolation, which can efficiently detect mosquitoes and track their trajectories with higher accuracy. The method does not require special equipment and works excellently even with low-resolution videos. Considering the mosquito size, the proposed method’s detection performance is validated using a tracker error and a custom metric that considers the mean distance between positions (estimated and ground truth), pooled standard deviation, and average accuracy. The results showed that the proposed method could successfully detect and track the flying (≈ 96% accuracy) as well as resting (100% accuracy) mosquitoes. The performance can be impacted in the case of occlusions and background clutters. Overall, this research serves as an efficient open-source tool to facilitate further examination of mosquito behavioural traits.</div

    Scenario 1 results obtained from Mask RCNN and interpolation.

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    Flying mosquitoes’ flight starting points are shown with dots, while the flight endpoints are shown with arrows. The mosquitoes in the ‘rest’ position are presented with filled marker dots. To distinguish the ground truth trajectories from estimated trajectories which will be discussed in the next section, the names of the mosquitoes for estimated trajectories are indicated with asterisk symbols. Different colours are also used to distinguish the mosquitoes from each other.</p

    Performance evaluation metric scenario 1.

    No full text
    Mosquito-borne diseases cause a huge burden on public health worldwide. The viruses that cause these diseases impact the behavioural traits of mosquitoes, including locomotion and feeding. Understanding these traits can help in improving existing epidemiological models and developing effective mosquito traps. However, it is difficult to understand the flight behaviour of mosquitoes due to their small sizes, complicated poses, and seemingly random moving patterns. Currently, no open-source tool is available that can detect and track resting or flying mosquitoes. Our work presented in this paper provides a detection and trajectory estimation method using the Mask RCNN algorithm and spline interpolation, which can efficiently detect mosquitoes and track their trajectories with higher accuracy. The method does not require special equipment and works excellently even with low-resolution videos. Considering the mosquito size, the proposed method’s detection performance is validated using a tracker error and a custom metric that considers the mean distance between positions (estimated and ground truth), pooled standard deviation, and average accuracy. The results showed that the proposed method could successfully detect and track the flying (≈ 96% accuracy) as well as resting (100% accuracy) mosquitoes. The performance can be impacted in the case of occlusions and background clutters. Overall, this research serves as an efficient open-source tool to facilitate further examination of mosquito behavioural traits.</div

    Performance evaluation metric scenario 3.

    No full text
    Mosquito-borne diseases cause a huge burden on public health worldwide. The viruses that cause these diseases impact the behavioural traits of mosquitoes, including locomotion and feeding. Understanding these traits can help in improving existing epidemiological models and developing effective mosquito traps. However, it is difficult to understand the flight behaviour of mosquitoes due to their small sizes, complicated poses, and seemingly random moving patterns. Currently, no open-source tool is available that can detect and track resting or flying mosquitoes. Our work presented in this paper provides a detection and trajectory estimation method using the Mask RCNN algorithm and spline interpolation, which can efficiently detect mosquitoes and track their trajectories with higher accuracy. The method does not require special equipment and works excellently even with low-resolution videos. Considering the mosquito size, the proposed method’s detection performance is validated using a tracker error and a custom metric that considers the mean distance between positions (estimated and ground truth), pooled standard deviation, and average accuracy. The results showed that the proposed method could successfully detect and track the flying (≈ 96% accuracy) as well as resting (100% accuracy) mosquitoes. The performance can be impacted in the case of occlusions and background clutters. Overall, this research serves as an efficient open-source tool to facilitate further examination of mosquito behavioural traits.</div

    Scenario 2 results obtained from Mask RCNN and interpolation.

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    Scenario 2 results obtained from Mask RCNN and interpolation.</p

    Scenario 1 results obtained from Mask RCNN and interpolation.

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    Scenario 1 results obtained from Mask RCNN and interpolation.</p

    Impact of interpolation on trajectory estimation.

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    In the top 2 charts, the impact of interpolation with and without interpolation is shown individually, while in the bottom graphs, they are shown along with ground truth trajectories. It can be seen from the green dotted circled areas that spline interpolation helped to fill the missing points and achieve continuous tracking with higher accuracy.</p

    Experimental setup and trajectory estimation methodology.

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    (a) The experimental setup consisted of a plexiglass cage, fabric net, sugar water bottle, mosquitoes, and camera. The number of mosquitoes in each recording was different. (b) The trajectory estimation was based on the mask RCNN framework and cubic spline interpolation. The training images data was fed into the Mask RCNN framework. Mask RCNN consists of RoIAlign to preserve spatial information. RoIAlign uses binary interpolation, which creates fix size feature map. RoIAlign layer output is fed into the mask head, which is consisted of two convolutional layers. Through this, masks are generated for each ROI, thus pixel to pixel segmentation of the images. Then video sequence data were processed using the trained model, and coordinates were extracted. Finally, the cubic spline interpolation was applied to fill the missing data smoothly.</p

    Error tracking for scenario 1.

    No full text
    Mosquito-borne diseases cause a huge burden on public health worldwide. The viruses that cause these diseases impact the behavioural traits of mosquitoes, including locomotion and feeding. Understanding these traits can help in improving existing epidemiological models and developing effective mosquito traps. However, it is difficult to understand the flight behaviour of mosquitoes due to their small sizes, complicated poses, and seemingly random moving patterns. Currently, no open-source tool is available that can detect and track resting or flying mosquitoes. Our work presented in this paper provides a detection and trajectory estimation method using the Mask RCNN algorithm and spline interpolation, which can efficiently detect mosquitoes and track their trajectories with higher accuracy. The method does not require special equipment and works excellently even with low-resolution videos. Considering the mosquito size, the proposed method’s detection performance is validated using a tracker error and a custom metric that considers the mean distance between positions (estimated and ground truth), pooled standard deviation, and average accuracy. The results showed that the proposed method could successfully detect and track the flying (≈ 96% accuracy) as well as resting (100% accuracy) mosquitoes. The performance can be impacted in the case of occlusions and background clutters. Overall, this research serves as an efficient open-source tool to facilitate further examination of mosquito behavioural traits.</div
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